Python scripting for

The primary purpose of this book is to help scientists and engineers working intensively with computers to become more productive, have more fun, and increase the reliability of their investigations. Scripting in the Python programming language can be a key tool for reaching these goals [27,29]. The term scripting means different things to different people. By scripting I mean developing programs of an administering nature, mostly to organize your work, using languages where the abstraction level is higher and programming is more convenient than in Fortran, C, C++, or Java.

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BornAgain is a free and open-source multi-platform software framework for simulating and fitting X-ray and neutron reflectometry, off-specular scattering, and grazing-incidence small-angle scattering (GISAS). This paper concentrates on GISAS. Support for reflectometry and off-specular scattering has been added more recently, is still under intense development and will be described in a later publication. BornAgain supports neutron polarization and magnetic scattering. Users can define sample and instrument models through Python scripting.

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This book provides an introduction to the Python programming language. Python is a popular programming language used for both standalone programs and scripting applications in a wide variety of domains. It is free, portable, powerful, and remarkably easy to use. Whether you are new to programming or a professional developer, this book’s goal is to bring you quickly up to speed on the fundamentals of the core Python language.

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Pro Android Python with SL4A is for programmers and hobbyists who want to write apps for Android devices without having to learn Java first. Paul Ferrill leads you from installing the Scripting Layer for Android (SL4A) to writing small scripts, to more complicated and interesting projects, and finally to uploading and packaging your programs to an Android device.

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This book provides a set of design and implementation guidelines for writing secure programs for Linux and Unix systems. Such programs include application programs used as viewers of remote data, web applications (including CGI scripts), network servers, and setuid/setgid programs. Specific guidelines for C, C++, Java, Perl, PHP, Python, Tcl, and Ada95 are included. For a current version of the book,

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A step-by-step guide on how to use Python for CGI scripting, GUI development, network programming, and much more! Organizations such as NASA, Hewlett-Packard, and Xerox have already discovered the power that Python has to offer. This multipurpose development language can be used on virtually every platform, from Windows and Linux to OS/2 and Amiga. With its unique task-oriented approach, this book explores the language basics and then describes how to quickly begin using it for development work.

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Systems Biology Markup Language (SBML) is the standard model representation and description language in systems biology. Enriching and analysing systems biology models by integrating the multitude of available data, increases the predictive power of these models. This may be a daunting task, which commonly requires bioinformatic competence and scripting.

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Biological pathways are descriptive diagrams of biological processes widely used for functional analysis of differentially expressed genes or proteins. Primary data analysis, such as quality control, normalisation, and statistical analysis, is often performed in scripting languages like R, Perl, and Python.

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