
Kinetic studies on endo-b-galactosidase by a novel colorimetric assay
and synthesis of
N
-acetyllactosamine-repeating oligosaccharide
b-glycosides using its transglycosylation activity
Takeomi Murata, Takeshi Hattori, Satoshi Amarume, Akiko Koichi and Taichi Usui
Department of Applied Biological Chemistry, Shizuoka University, Japan
Novel chromogenic substrates for endo-b-galactosidase
were designed on the basis of the structural features of
keratan sulfate. Galb1-4GlcNAcb1-3Galb1-4GlcNAcb-
pNP (2), which consists of two repeating units of N-acetyl-
lactosamine, was synthesized enzymatically by consecutive
additions of GlcNAc and Gal residues to p-nitrophenyl
b-N-acetyllactosaminide. In a similar manner, Glc-
NAcb1-3Galb1-4GlcNAcb-pNP (1), GlcNAcb1-3Galb1-
4Glcb-pNP (3), Galb1-4GlcNAcb1-3Galb1-4Glcb-pNP (4),
Galb1-3GlcNAcb1-3Galb1-4Glcb-pNP (5), and Galb1-
6GlcNAcb1-3Galb1-4Glcb-pNP (6) were synthesized as
analogues of 2. Endo-b-galactosidases released GlcNAcb-
pNP or Glcb-pNP in an endo-manner from each substrate.
A colorimetric assay for endo-b-galactosidase was devel-
oped using the synthetic substrates on the basis of the
determination of p-nitrophenol liberated from GlcNAcb-
pNP or Glcb-pNP formed by the enzyme through a coupled
reaction involving b-N-acetylhexosaminidase (b-NAHase)
or b-
D
-glucosidase. Kinetic analysis by this method showed
that the value of V
max
/K
m
of 2for Escherichia freundii endo-
b-galactosidase was 1.7-times higher than that for keratan
sulfate, indicating that 2is very suitable as a sensitive sub-
strate for analytical use in an endo-b-galactosidase assay.
Compound 1still acts as a fairly good substrate despite the
absence of a Gal group in the terminal position. In addition,
the hydrolytic action of the enzyme toward 2was shown to
be remarkably promoted compared to that of 4by the
presence of a 2-acetamide group adjacent to the p-nitro-
phenyl group. This was the same in the case of a comparison
of 1and 3. Furthermore, the enzyme also catalysed a
transglycosylation on 1and converted it into GlcNAc
b1-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb-pNP (9)and
GlcNAcb1-3Galb1-4GlcNAcb1-3Galb1-4GlcNAcb1-3Galb1-
4GlcNAcb-pNP (10) as the major products, which have
N-acetyllactosamine repeating units.
Keywords: endo-b-galactosidase; enzyme assay; kinetics;
poly (N-acetyllactosamine); transglycosylation.
Endo-b-galactosidases were discovered as keratan sulfate-
degrading enzymes, so-called keratanases, in culture filtrates
of Escherichia freundii (glycoside hydrolase family 16) [1],
Coccobacillus sp. [2], Pseudomonas sp. [3], Flavobacterium
keratolyticus (glycoside hydrolase family 16) [4,5], and
Bacteroides fragilis [6]. E. freundii keratanase was found to
have hydrolysing activity for a wide range of nonsulfated
oligosaccharides isolated from human milk and carbohy-
drate moieties of glycoproteins and glycolipids [7–10]. The
use of endo-b-galactosidase has been expanded to detection
of poly (N-acetyllactosamine) chains in a variety of complex
glycoconjugates in addition to keratan sulfate. Bacteroides
fragilis endo-b-galactosidase has properties similar to those
of E. freundii endo-b-galactosidase [11–13]. Therefore, the
endo-b-galactosidases from E. freundii and B. fragilis have
been widely used as tools for structural and functional
analyses of glycans involved in glycoconjugates.
An assay using keratan sulfate as a substrate has been
widely used for estimation of endo-b-galactosidase activity.
However, this method is not always reproducible because
of lack of uniformity of the polymer. Methods using
low molecular mass substrates have been preferred and
recommended for accurate determination of activities of
endoglycosidases such as a-amylase [14], lysozyme [15],
and endo-b-N-acetylglucosaminidase [16], because the
purity of the substrate and the reaction pattern can be
determined exactly. This led us to develop a substrate
suitable for use in the analysis of endo-b-galactosidase. A
series of chromogenic substances having a partially substi-
tuted unit of poly (N-acetyllactosamine) were designed as
substrate analogues for this enzyme because systematic
kinetic studies on the structural modification of substrates
would be helpful in revealing the requirements for binding
and catalytic specificity. In general, glycosidase can cause
transglycosylation as well as hydrolysis as a reverse
reaction [17–19]. Transglycosylation of endo-type glycosi-
dase is now used for the synthesis of N-acetyllactosamine-
repeating oligosaccharide.
Correspondence to T. Murata, Department of Applied Biological
Chemistry, Shizuoka University, 836 Ohya, Shizuoka, 422-8529,
Japan. Fax and Tel.: +81 54 238 4872,
E-mail: actmura@agr.shizuoka.ac.jp
Abbreviations:pNP, p-nitrophenyl; b-NAHase, b-N-acetylhexos-
aminidase; b4GalT, b-1,4-galactosyltransferase; b3GnT, b-1,3-N-
acetylglucosaminyltransferase; HPAEC-PAD, high-performance
anion exchange chromatography-pulsed amperometric detection.
Enzymes: endo-b-galactosidase (EC 3.2.1.103); b-
D
-galactosidase
(EC 3.2.1.23); b-1,4-galactosyltransferase (EC 2.4.1.22); b-1,3-N-
acetylglucosaminyltransferase (EC 2.4.1.149); b-D-glucosidase
(EC 3.2.1.21); b-N-acetylhexosaminidase (EC 3.2.1.52).
(Received 20 December 2002, revised 11 July 2003,
accepted 17 July 2003)
Eur. J. Biochem. 270, 3709–3719 (2003) FEBS 2003 doi:10.1046/j.1432-1033.2003.03757.x