Batch searching

In bioinformatics community, many tasks associate with matching a set of protein query sequences in large sequence datasets. To conduct multiple queries in the database, a common used method is to run BLAST on each original querey or on the concatenated queries. It is inefficient since it doesn’t exploit the common subsequences shared by queries.

12p viconnecticut2711 29-10-2020 12 2   Download

This paper develops a hybrid metaheuristic algorithm based on the Genetic Algorithm. In the developed algorithm, (1) a heuristic, (2) a local search, and (3) a restart phase is proposed.

24p tocectocec 24-05-2020 17 3   Download

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224p trac2_123 16-04-2013 59 3   Download