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Software pipeline
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Lecture Computer graphics - Lesson 2: Graphics systems. This lesson provides students with content about: graphics pipeline; graphics software; graphics hardware;... Please refer to the detailed content of the lecture!
43p
codabach1016
03-05-2024
1
0
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Ebook "High-performance in-memory genome data analysis: How in-memory database technology accelerates personalized medicine" provide details on innovative approaches to enabling the processing, combination, and analysis of relevant data in real-time. The book bridges the gap between medical experts, such as physicians, clinicians, and biological researchers, and technology experts, such as software developers, database specialists, and statisticians.
239p
manmanthanhla0201
26-02-2024
7
1
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Ebook "Computer organization and design: The hardware/software interface (3rd edition)" presents an entire MIPS instruction set—instruction by instruction—the fundamentals of assembly language, computer arithmetic, pipelining, memory hierarchies and I/O. A new aspect of the third edition is the explicit connection between program performance and CPU performance. The authors show how hardware and software components--such as the specific algorithm, programming language, compiler, ISA and processor implementation impact program performance.
689p
tichhythan
17-08-2023
11
7
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Lecture Computer Graphics and Virtual Reality slides - Lesson 2: Graphics systems, presents the following content: Graphics pipeline; Graphics software; Graphics hardware.
43p
chankora08
04-07-2023
6
4
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Advanced Computer Architecture - Lecture 21: Instruction level parallelism. This lecture will cover the following: static multiple issue: VLIW approach; detecting and enhancing loop level parallelism; software pipelining; multiple-issue overheads; VLIW/EPIC processor;...
92p
haoasakura
30-05-2022
9
3
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Advanced Computer Architecture - Lecture 22: Instruction level parallelism. This lecture will cover the following: software pipelining and trace scheduling; eliminating dependent computations; superblocks; reducing dependent computations; uncovering instruction level parallelism;...
85p
haoasakura
30-05-2022
12
3
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Advanced Computer Architecture - Lecture 31: Memory hierarchy design. This lecture will cover the following: reducing miss penalty or miss rate using parallelism; reducing hit time; non-blocking caches; hardware prefetch; software (compiler controlled) prefetch; pipelined cache access; trace caches;...
50p
haoasakura
30-05-2022
13
3
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Single-cell RNA-sequencing (scRNAseq) and the set of attached analysis methods are evolving fast, with more than 560 software tools available to the community, roughly half of which are dedicated to tasks related to data processing such as clustering, ordering, dimension reduction, or normalization.
28p
viarchimedes
26-01-2022
10
0
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To maintain the quality and final release cycle of software, Software Testing become a key challenges one can face. Software testing play important role from the beginning till the release of application. Current paper focus on tradition testing phase along with enhanced data driven and pipeline integrated techniques to maintain best quality of software.
4p
spiritedaway36
28-11-2021
15
2
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A widely applied approach to extract knowledge from high-throughput genomic data is clustering of gene expression profiles followed by functional enrichment analysis. This type of analysis, when done manually, is highly subjective and has limited reproducibility. Moreover, this pipeline can be very time-consuming and resource-demanding as enrichment analysis is done for tens to hundreds of clusters at a time. Thus, the task often needs programming skills to form a pipeline of different software tools or R packages to enable an automated approach.
17p
vitzuyu2711
29-09-2021
6
1
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A virus community is the spectrum of viral strains populating an infected host, which plays a key role in pathogenesis and therapy response in viral infectious diseases. However automatic and dedicated pipeline for interpreting virus community sequencing data has not been developed yet.
10p
vijeeni2711
24-07-2021
8
0
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An incremental, loosely planned development approach is often used in bioinformatic studies when dealing with custom data analysis in a rapidly changing environment. Unfortunately, the lack of a rigorous software structuring can undermine the maintainability, communicability and replicability of the process.
14p
viwyoming2711
16-12-2020
20
1
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The discovery and mapping of genomic variants is an essential step in most analysis done using sequencing reads. There are a number of mature software packages and associated pipelines that can identify single nucleotide polymorphisms (SNPs) with a high degree of concordance.
8p
vikentucky2711
26-11-2020
14
1
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Fuelled by the advent and subsequent development of next generation sequencing technologies, metagenomics became a powerful tool for the analysis of microbial communities both scientifically and diagnostically.
17p
vikentucky2711
24-11-2020
9
1
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Workflows, or computational pipelines, consisting of collections of multiple linked tasks are becoming more and more popular in many scientific fields, including computational biology. For example, simulation studies, which are now a must for statistical validation of new bioinformatics methods and software, are frequently carried out using the available workflow platforms.
19p
vikentucky2711
24-11-2020
14
1
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There has been an enormous expansion of use of chromatin immunoprecipitation followed by sequencing (ChIP-seq) technologies. Analysis of large-scale ChIP-seq datasets involves a complex series of steps and production of several specialized graphical outputs.
13p
vioklahoma2711
19-11-2020
15
1
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Detecting somatic mutations in whole exome sequencing data of cancer samples has become a popular approach for profiling cancer development, progression and chemotherapy resistance. Several studies have proposed software packages, filters and parametrizations.
9p
vioklahoma2711
19-11-2020
15
2
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Although metatranscriptomics—the study of diverse microbial population activity based on RNA-seq data is rapidly growing in popularity, there are limited options for biologists to analyze this type of data.
12p
vioklahoma2711
19-11-2020
8
1
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Gene prediction is one of the most important steps in the genome annotation process. A large number of software tools and pipelines developed by various computing techniques are available for gene prediction. However, these systems have yet to accurately predict all or even most of the protein-coding regions.
7p
vioklahoma2711
19-11-2020
13
1
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DNA methylation is an important mechanism of epigenetic regulation in development and disease. New generation sequencers allow genome-wide measurements of the methylation status by reading short stretches of the DNA sequence (Methyl-seq). Several software tools for methylation analysis have been proposed over recent years.
6p
vioklahoma2711
19-11-2020
11
1
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