Dynamics of gene regulatory networks and their dependence on network topology and quantitative parameters – the case of phage λ

CABeRNET: A Cytoscape app for augmented Boolean models of gene regulatory NETworks

12 p | 18 | 2

Statistical inference for time course RNA-Seq data using a negative binomial mixed-effect model

13 p | 21 | 2

Finding gene regulatory network candidates using the gene expression knowledge base

14 p | 15 | 1

PeTTSy: A computational tool for perturbation analysis of complex systems biology models

19 p | 26 | 1

Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat

16 p | 11 | 1

Time-lagged Ordered Lasso for network inference

15 p | 19 | 1

The oilseed rape developmental expression resource: A resource for the investigation of gene expression dynamics during the floral transition in oilseed rape

10 p | 9 | 1

Genome-wide dynamic network analysis reveals a critical transition state of flower development in Arabidopsis

18 p | 11 | 0

The Local Edge Machine: Inference of dynamic models of gene regulation

13 p | 9 | 0