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GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies

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A seed location filter comes into play before alignment, discarding seed locations that alignment would deem a poor match. The ideal seed location filter would discard all poor match locations prior to alignment such that there is no wasted computation on unnecessary alignments.

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Nội dung Text: GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies

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