Tiling Nussinov’s RNA folding loop nest with a space-time approach
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An RNA primary structure, or sequence, is a single strand considered as a chain of nucleotides from the alphabet AUGC (adenine, uracil, guanine, cytosine). The strand can be folded onto itself, i.e., one segment of an RNA sequence might be paired with another segment of the same RNA sequence into a two-dimensional structure composed by a list of complementary base pairs, which are close together with the minimum energy.
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