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Genotypic states
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We evaluated the performance of single-nucleotide polymorphism (SNP) genotyping arrays OncoScan (Thermo Fisher Scientific, San Diego, CA) and Infinium CytoSNP-850K (CytoSNP; Illumina, Waltham, MA) for assessing homologous recombination deficiency (HRD) genomic instability.
9p
vileonardodavinci
23-12-2023
4
3
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Part 1 book "Smart livestock nutrition" includes content: Putting smart into nutrition, matching feed characteristics to animal requirements through plant breeding, circular feed production and consumption in the context of smart animal nutrition, assessment of the nutritive value of individual feeds and diets by novel technologies, large scale phenotyping and genotyping - state of the art and emerging challenges.
145p
oursky07
23-10-2023
5
3
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Reniform nematode (Rotylenchulus reniformis) has emerged as one of the most destructive root pathogens of upland cotton (Gossypium hirsutum) in the United States. Management of R. reniformis has been hindered by the lack of resistant G. hirsutum cultivars; however, resistance has been frequently identified in germplasm accessions from the G. arboreum collection.
11p
vihagrid
30-01-2023
7
3
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The prevalence of gastrointestinal (GI) neoplastic polyps in Jack Russell terriers (JRTs) has increased in Japan since the late 2000s. Recently, we demonstrated that JRTs with GI polyps harbor identical germline variant in the APC gene (c.[462_463delinsTT]) in the heterozygous state. Thus, this disease is an autosomal dominant hereditary disorder.
9p
vidarwin
23-02-2022
13
1
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Glioblastoma is a fatal brain tumour with a poor patient survival outcome. Hypoxia has been shown to reprogram cells towards a stem cell phenotype associated with self-renewal and drug resistance properties. Activation of hypoxia-inducible factors (HIFs) helps in cellular adaptation mechanisms under hypoxia.
20p
vimahuateng
26-11-2021
6
0
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PLINK is probably the most used program for analyzing SNP genotypes and runs of homozygosity (ROH), both in human and in animal populations. The last decade, ROH analyses have become the state-of-the-art method for inbreeding assessment.
14p
vijeeni2711
24-07-2021
13
0
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The United States Department of Agriculture (USDA) National Plant Germplasm System (NPGS) sorghum core collection contains 3011 accessions randomly selected from 77 countries. Genomic and phenotypic characterization of this core collection is necessary to encourage and facilitate its utilization in breeding programs and to improve conservation efforts.
15p
vijeeni2711
24-07-2021
12
0
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A sustainable breeding program requires a minimum level of germplasm diversity to provide varied options for the selection of new breeding lines. To maximize genetic gain of the North Dakota State University (NDSU) flax breeding program, we aimed to increase the genetic diversity of its parental stocks by incorporating diverse genotypes.
13p
vijeeni2711
30-06-2021
10
1
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Not all cells in a given individual are identical in their genomic makeup. Mosaicism describes such a phenomenon where a mixture of genotypic states in certain genomic segments exists within the same individual. Mosaicism is a prevalent and impactful class of non-integer state copy number variation (CNV).
10p
vilichoo2711
23-06-2021
8
1
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Analysis and comparison of the transcriptome of human hepatocytes infected with the Yellow Fever virus to verify the transcriptional profile of both genotypes, in response to viral infection. The sample used corresponds to strains of YFV code H622205, from the state of Goiás-GO (Brazil), a fatal human case isolated from the patient's blood and serum.
14p
trinhthamhodang11
27-04-2021
17
2
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Early blight is the most devastating disease of tomato it is caused by pathogens i.e. Alternaria solani. In tropical and subtropical countries it creates hazardous effect. It is also a common problem in United Kingdom, Australia, India, Nepal and United States. It is one of the most common foliar diseases of tomatoes. The disease can occur over a wide range of climatic conditions, but is most prominent in areas with heavy dew, rainfall and high relative humidity. Every year sever disease appears in north India.
6p
chauchaungayxua10
19-03-2021
18
3
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The study was conducted at the Education and Research Farm of the Department of Botany, College of Agriculture, Dapoli, Dist. Ratnagiri, Maharashtra state during the kharif and rabi2017-18 and 2018-19 seasons, to study the “Effect of seasons and plant spacings on quality parameters of groundnut (Arachis hypogaea L.) genotypes”. The experiment was laid out in split plot design replicated three times. The main plot treatment consists of two seasons (kharif and rabi); however, sub plot treatments consist of eleven groundnut genotypes.
10p
chauchaungayxua10
18-03-2021
12
2
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Cotton is one of the most commercial crops of the world and in the maintaining of many economics. Cotton is cultivated in nearly 100 countries with China, India, United States, Pakistan and Brazil being the five largest producers of cotton. Cotton is the back born of textile industry and provides raw material in the form of lint to the textile industry. A field experiment was conducted, with hirsutum cotton genotype H-1300 during Kharif season 2015 at the Oil Seed Farm of C.S. Azad University of Agriculture and Technology, Kanpur.
9p
trinhthamhodang1218
26-02-2021
12
2
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The present study aimed to estimate the genetic variability, heritability and genetic advance for yield and yield components of four faba bean genotypes and correlation coefficients between seed yield and other traits were also investigated.
9p
cothumenhmong9
18-01-2021
10
1
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Although bitter brinjal is cultivated in all the state of North eastern region of India but there is no improved variety that can be recommended to the farmers for its commercial cultivation in the region. Therefore, studies were conducted to find out variation in physicochemical characters of 15 genotypes of wild brinjal and to achieve superior cultivar with satisfactory yield along with good fruit quality under the condition of North eastern region.
8p
gaocaolon9
22-12-2020
6
2
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The present study aimed to genotype a population of Vechur and crossbred cattle for SNPs in the QTLs associated with resistance /susceptibility to tick infestation in cattle.
10p
trinhthamhodang9
16-12-2020
11
2
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Onion (Allium cepa L.) is one of the important commercial spice crop grown in India for its varied utilization in different cuisines. Odisha produces less than 20% of its consumption needs and for the rest it has to depend on imports from other states. The production and productivity of onion mainly depends upon its genotype, edaphic and climatological factors.
6p
trinhthamhodang9
16-12-2020
8
1
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Phenotypic and genotypic diversity of rhizobia isolated from root and soil rhizosphere of summer mungbean was assessed on the basis of plant growth promoting traits and using RAPD primers. In present studies, isolates of rhizobia from nodules were purified on Congo red Yeast Mannitol Agar (CRYEMA) medium from summer mungbean growing areas of Punjab state, India.
14p
caygaocaolon8
07-11-2020
13
1
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The productivity of wheat which was 3140 kg/hectare in 2011-12. The major increase in the productivity of wheat has been observed in the states of Haryana, Punjab and Uttar Pradesh.
4p
angicungduoc8
07-11-2020
7
1
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Molecular characterization of measles virus among children in parts of north western Nigeria, out of 30 samples analysed for PCR with specific primers, 21 samples confirmed presence of measles virus infection. Genotype B3 strain was confirmed in four (4) samples selected from different location within the state in Northern Western Nigeria. Sokoto, Jigwa and Kaduna States, Ten (10) IgM positive samples from each States were randomly selected and subjected to RT PCR, out of the ten (10) IgM positive samples from each state.
11p
nguaconbaynhay8
13-10-2020
19
2
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