Molecular network
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In this study, we explore the potential of graph neural networks (GNNs), in combination with transfer learning, for the prediction of molecular solubility, a crucial property in drug discovery and materials science. Our approach begins with the development of a GNN-based model to predict the dipole moment of molecules.
8p viwalton 02-07-2024 3 1 Download
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This study is based on network pharmacology and molecular docking technology to predict the possible target of PSP treatment of breast cancer, and use experiments to verify the effect and mechanism of PSP on breast cancer.
14p vikoch 27-06-2024 1 1 Download
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To elucidate these issues, a detailed study of the microstructure of amorphous V2O5 under pressure was needed. The spatial distributions of atoms, the link distributions and the geometrical distributions of the free volumes need to be fully investigated. The distribution of free volume in the amorphous V2O5 network also needs to be visualized. These are the main contents in this paper.
11p viambani 18-06-2024 2 1 Download
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Crystalline structure of CaO-P2O5-SiO2 system at 3,000 K were investigated by molecular dynamic simulation. The models with different concentrations of P2O5 (5-40 mol%) were constructed by using Born-Mayer-Huggins potentials. The size of models was from 5,270-5,520 atoms. The local environment of elements and glassy-network structure were investigated in detail.
13p viambani 18-06-2024 5 1 Download
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Ebook "Functional coherence of molecular networks in bioinformatics" will provide a detailed review of existing knowledge on the functional characterization of biological networks. In 15 chapters authored by an international group of prolific systems biology and bioinformatics researchers, it will organize, conceptualize, and summarize the existing core of research results and computational methods on understanding biological function from a network perspective.
235p ladongphongthanh1008 22-04-2024 5 3 Download
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Ebook "Networking of chaperones by co-chaperones" describes how the function of the major molecular chaperones is regulated by a cohort of diverse non-client proteins, known as co-chaperones. The second edition includes the current status of the field and descriptions of a number of novel co-chaperones that have been recently identified. This new edition has a strong focus on the role of co-chaperones in human disease and as putative drug targets.
152p ladongphongthanh1008 22-04-2024 4 4 Download
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Ebook "Proteomics and protein-protein interactions: Biology, chemistry, bioinformatics, and drug design" attempts to bridge the two extreme ends of protein science: on one end, systems proteomics, which describes, at a system level, the intricate connection network that proteins form in a cell, and on the other end, protein chemistry and biophysics, which describe the molecular properties of individual proteins and the structural and thermodynamic basis of their interactions within the network.
325p ladongphongthanh1008 22-04-2024 5 2 Download
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Ebook "Endosomes" represent a fascinating interconnected network of thousands of vesicles that transport various cargoes, mainly proteins and lipids, to distant cellular destinations. How endosomes function, what coordinates the molecular determinants at each step of their dynamic life cycle and what their biological and medical relevance is, are among the questions addressed in this book.
167p ladongphongthanh1008 22-04-2024 2 2 Download
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Ebook "Ionic liquid properties: From molten salts to RTILs" deals with ionic liquids, i.e., with single substances in their liquid state of aggregation that are dissociated into ions to a major extent. Because of the enormous amount of information that is available regarding this subject, the book does not deal with mixtures of ionic liquids nor with their solution (as electrolytes) in molecular solvents.
250p tracanhphuonghoa1007 22-04-2024 4 3 Download
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Cerebral amyloidosis, neuroinflammation, and tauopathy are key features of Alzheimer’s disease (AD), but interactions among these features remain poorly understood. Our previous multiscale molecular network models of AD revealed TYROBP as a key driver of an immune- and microglia-specific network that was robustly associated with AD pathophysiology.
20p vibransone 28-03-2024 3 2 Download
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Gastric cancer is among the most lethal human malignancies. Previous studies have identified molecular aberrations that constitute dynamic biological networks and genomic complexities of gastric tumors. However, the clinical translation of molecular-guided targeted therapy is hampered by challenges. Notably, solid tumors often harbor multiple genetic alterations, complicating the development of effective treatments.
12p vibransone 28-03-2024 6 2 Download
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Long-term care facilities (LTCF) are potential reservoirs for methicillin-resistant Staphylococcus aureus (MRSA), control of which may reduce MRSA transmission and infection elsewhere in the healthcare system. Whole-genome sequencing (WGS) has been used successfully to understand MRSA epidemiology and transmission in hospitals and has the potential to identify transmission between these and LTCF.
9p vioraclene 31-03-2024 5 2 Download
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Alzheimer’s disease (AD) is the most common form of dementia, characterized by progressive cognitive impairment and neurodegeneration. However, despite extensive clinical and genomic studies, the molecular basis of AD development and progression remains elusive.
21p vioraclene 31-03-2024 2 2 Download
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Inter-tissue molecular interactions are critical to the function and behavior of biological systems in multicellular organisms, but systematic studies of interactions between tissues are lacking. Also, existing studies of inter-tissue interactions are based on direct gene expression correlations, which can’t distinguish correlations due to common genetic architectures versus biochemical or molecular signal exchange between tissues.
15p vioraclene 31-03-2024 8 2 Download
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Contemporary deep learning approaches show cutting-edge performance in a variety of complex prediction tasks. Nonetheless, the application of deep learning in healthcare remains limited since deep learning methods are often considered as non-interpretable black-box models.
16p vibransone 28-03-2024 4 2 Download
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Synovial fibroblasts (SFs) are specialized cells of the synovium that provide nutrients and lubricants for the proper function of diarthrodial joints. Recent evidence appreciates the contribution of SF heterogeneity in arthritic pathologies. However, the normal SF profiles and the molecular networks that govern the transition from homeostatic to arthritic SF heterogeneity remain poorly defined.
25p viellison 28-03-2024 7 2 Download
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Molecular measurements of the genome, the transcriptome, and the epigenome, often termed multi-omics data, provide an in-depth view on biological systems and their integration is crucial for gaining insights in complex regulatory processes.
21p viellison 28-03-2024 8 2 Download
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Pathway enrichment analysis (PEA) is a common method for exploring functions of hundreds of genes and identifying disease-risk pathways. Moreover, diferent pathways exert their functions through crosstalk.
20p viellison 28-03-2024 2 1 Download
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Ebook "Plant tissue culture engineering" signals a turning point: the recognition that this specialized field of plant science must be integrated with engineering principles in order to develop efficient, cost effective, and large scale applications of these technologies. I am most impressed with the organization of this volume, and the extensive list of chapters contributed by expert authors from around the world who are leading the emergence of this interdisciplinary enterprise.
469p cotieubac1004 15-03-2024 4 0 Download
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Genotypes are strongly associated with disease phenotypes, particularly in brain disorders. However, the molecular and cellular mechanisms behind this association remain elusive. With emerging multimodal data for these mechanisms, machine learning methods can be applied for phenotype prediction at different scales, but due to the black-box nature of machine learning, integrating these modalities and interpreting biological mechanisms can be challenging.
19p vicwell 29-02-2024 4 2 Download