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Optical map
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Massively parallel DNA sequencing, such as exome sequencing, has become a routine clinical procedure to identify pathogenic variants responsible for a patient’s phenotype. Exome sequencing has the capability of reliably identifying inherited and de novo single-nucleotide variants, small insertions, and deletions.
11p
vioraclene
31-03-2024
3
1
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High sequence identity between segmental duplications (SDs) can facilitate copy number variants (CNVs) via non-allelic homologous recombination (NAHR). These CNVs are one of the fundamental causes of genomic disorders such as the 3q29 deletion syndrome (del3q29S).
17p
vicwell
29-02-2024
2
1
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Part 1 book "An introduction to beam physics" includes content: Beams and beam physics; linear beam optics; fields, potentials and equations of motion; the linearization of the equations of motion; computation and properties of maps.
155p
muasambanhan07
08-02-2024
0
0
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This thesis presents an evaluation of the mapping performance of a variety of SLAM algorithms that are freely available in the Robot Operating System (ROS), in conjunction with ranging data from various ranging sensors suitable for use onboard small UAS. To compare the quality of the generated maps, an existing metric was initially employed, however deficiencies noted in this metric led to the development of two new metrics. A discussion of both the existing and new map quality metrics, and the advantages and disadvantages of each, is presented as part of this thesis.
99p
runthenight04
02-02-2023
6
1
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Spatially resolved optically stimulated luminescence (OSL) offers a means for rapid assessment of dose distributions in retrospective dosimetry and geochronology. Until recently, OSL imaging systems have largely been restricted to measurements of millimetre scale samples; this approach is not well suited for applications where the physical process of interest operates on centimetre scale (e.g., depth dependent trap eviction in exposed rocks, sediment mixing in soils, attenuation of gamma radiation, etc.).
11p
vironald
15-12-2022
13
3
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(BQ) Ebook Dynamical systems with applications using Matlab (Second Edition): Part 1 includes the following content: A Tutorial Introduction to MATLAB, linear discrete dynamical systems, nonlinear discrete dynamical systems , complex iterative maps, electromagnetic waves and optical resonators, fractals and multifractals, the image processing toolbox, differential equations, planar systems, interacting species.
246p
runordie6
10-08-2022
6
2
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Numerous scaffold-level sequences for wheat are now being released and, in this context, we report on a strategy for improving the overall assembly to a level comparable to that of the human genome.
18p
vigalileogalilei
27-02-2022
18
1
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We present a new method, OMSV, for accurately and comprehensively identifying structural variations (SVs) from optical maps. OMSV detects both homozygous and heterozygous SVs, SVs of various types and sizes, and SVs with or without creating or destroying restriction sites. We show that OMSV has high sensitivity and specificity, with clear performance gains over the latest method.
19p
vialfrednobel
29-01-2022
11
0
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Creating gapless telomere-to-telomere assemblies of complex genomes is one of the ultimate challenges in genomics. We use two independent assemblies and an optical map-based merging pipeline to produce a maize genome (B73-Ab10) composed of 63 contigs and a contig N50 of 162 Mb. T
17p
viarchimedes
26-01-2022
7
0
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A series of new push–pull chromophores were synthesized in moderate to very high yields (65%–97%) by treating TCNE and TCNQ with alkynes substituted by electron-rich diethylaniline and polycyclic aromatic hydrocarbons. Some of the chromophores exhibit strong intramolecular charge-transfer bands in the near-IR region with λmax values between 695 and 749 nm. With the help of experimental and theoretical analysis, it is concluded that the trend in λmax values is affected by PAH substituents sterically, not electronically.
50p
tudichquannguyet
29-11-2021
7
0
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The paper presents the research to simulate air quality from PM2.5 indicator determined by satellite data. The relationship between ground-based station data and Aerosol Optical Depth (AOD) imagery from Moderate Resolution Imaging Spectroradiometer (MODIS) was examined to establish a regression equation for mapping PM2.5 distribution in Ho Chi Minh city (HCMC).
4p
viwinter2711
05-10-2021
8
1
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The lower Dipteran fungus fly, Sciara coprophila, has many unique biological features that challenge the rule of genome DNA constancy. For example, Sciara undergoes paternal chromosome elimination and maternal X chromosome nondisjunction during spermatogenesis, paternal X elimination during embryogenesis, intrachromosomal DNA amplification of DNA puff loci during larval development, and germline-limited chromosome elimination from all somatic cells.
23p
vitzuyu2711
29-09-2021
12
1
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The ability to generate long sequencing reads and access long-range linkage information is revolutionizing the quality and completeness of genome assemblies. Here we use a hybrid approach that combines data from four genome sequencing and mapping technologies to generate a new genome assembly of the honeybee Apis mellifera.
19p
visilicon2711
20-08-2021
10
1
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Identifying individual subtelomeres and characterizing linked telomere (TTAGGG) n tract lengths and structural changes using our new single-molecule methodologies reveals the structural consequences of telomere damage, repair and recombination mechanisms in human ALT cells in unprecedented molecular detail and significant differences in different ALT-positive cell lines.
17p
vijeeni2711
24-07-2021
3
0
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The marine diatoms Thalassiosira pseudonana and Phaeodactylum tricornutum are valuable model organisms for exploring the evolution, diversity and ecology of this important algal group. Their reference genomes, published in 2004 and 2008, respectively, were the product of traditional Sanger sequencing.
25p
vilichoo2711
23-06-2021
12
1
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Whole genome sequencing is effective at identification of small variants, but because it is based on short reads, assessment of structural variants (SVs) is limited. The advent of Optical Genome Mapping (OGM), which utilizes long fluorescently labeled DNA molecules for de novo genome assembly and SV calling, has allowed for increased sensitivity and specificity in SV detection.
16p
vilichoo2711
25-06-2021
21
1
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This present optimized optical system; more data on aberration measurement; micro lens array; customized lens manufacturing; high order aberration map is on; ultra high precision KER Data; contact lens fitting assistance guide... Huvitz Việt Nam (Hotline: 094 686 1123) là nhà phân phối chính thức Thiết bị ngành Kính Mắt và Nhãn khoa của Hãng Huvitz - Hàn Quốc tại Việt Nam. http://huvitzvn.com https://www.facebook.com/huvitzvn
2p
domanhhung6291@gmail.com
07-05-2021
33
0
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Reference genome assemblies are valuable, as they provide insights into gene content, genetic evolution and domestication. The higher the quality of a reference genome assembly the more accurate the downstream analysis will be.
9p
viflorida2711
30-10-2020
13
2
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The long reads produced by third generation sequencing technologies have significantly boosted the results of genome assembly but still, genome-wide assemblies solely based on read data cannot be produced.
19p
vicolorado2711
22-10-2020
11
1
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Land cover mapping by optical remote sensing has many obstacles including clouds. Clouds block solar radiation coming to earth surface and reflective radiance from the earth surface to remote optical sensors resulting. Therefore, clouds result no-signal areas in images that cannot be used for study of ground objects.
8p
tamynhan4
06-09-2020
21
2
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