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Sequencing simulator
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Part 1 of ebook "Software engineering, artificial intelligence, networking and parallel/distributed computing 2011" includes the following main contents: analysis of ISSP environment II survey data using variable clustering; polar transformation system for offline handwritten character recognition; examining QoS guarantees for real-time CBR services in broadband wireless access networks; sin and sigmoid higher order neural networks for data simulations and predictions; a proposal of mouth shapes sequence code for Japanese pronunciation;...
90p
khuynhlinhnguyet1009
05-04-2024
3
1
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Part 2 book "Chemical process design and integration" includes content: Distillation sequencing for azeotropic distillation, heat exchange, pumping and compression, continuous process recycle structure, heat exchanger networks I – network targets, continuous process simulation and optimization, heat exchanger networks II – network design, batch processes, heat exchanger networks III – stream data, heat integration of reactors.
316p
muasambanhan08
01-03-2024
2
1
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This paper has proposed a method of designing Polar codes by determining a synthetic channels reliability index sequence based on the Polarization Weights (PW) method called the Improved Polarization Weights (IPW) method. The simulation results show that the error correction performance of the code designed according to IPW is better than the code structure selected for 5G NR and designed according to the original PW method.
16p
vigojek
02-02-2024
0
0
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Myelodysplastic Neoplasms (MDS) are clonal stem cell disorders characterized by ineffective hematopoiesis and progression to acute myeloid leukemia, myelodysplasia-related (AML-MR). A major mechanism of pathogenesis of MDS is the aberration of the epigenetic landscape of the hematopoietic stem cells and/or progenitor cells, especially DNA cytosine methylation, and demethylation.
18p
vialfrednobel
23-12-2023
4
3
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Part 2 book "Principles of sequencing and scheduling" includes content: Flow shop scheduling, stochastic flow shop scheduling, lot streaming procedures for the flow shop, scheduling groups of jobs, the job shop problem, simulation models for the dynamic job shop, network methods for project scheduling, resource constrained project scheduling, project analytics, analytics based safe project scheduling.
346p
oursky03
21-08-2023
9
6
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Part 2 book "Principles of sequencing and scheduling" includes content: Parallel machine models, flow shop scheduling, stochastic flow shop scheduling, lot streaming procedures for the flow shop, scheduling groups of simulation models for the dynamic job shop, network methods for project scheduling, resource constrained project scheduling, safe scheduling for projects.
295p
oursky01
24-07-2023
5
3
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Advances in next generation sequencing allow us to do DNA sequencing rapidly at a relatively low cost. Multiple bioinformatics methods have been developed to identify genomic variants from whole genome or whole exome sequencing data. The development of better variant calling methodologies is limited by the difficulty of assessing the accuracy and completeness of a new method.
7p
vicaptainmarvel
21-04-2023
5
2
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Investigating population continuity with ancient DNA under a spatially explicit simulation framework
Recent advances in sequencing technologies have allowed for the retrieval of ancient DNA data (aDNA) from skeletal remains, providing direct genetic snapshots from diverse periods of human prehistory.
13p
vinarcissa
21-03-2023
6
1
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During the last two decades, many QTL (quantitative trait locus) mapping experiments in pigs have been conducted using F2 crosses established from two outbred founder breeds. The founder breeds were frequently chosen from the Asian and European type breeds.
8p
vinarcissa
21-03-2023
2
1
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Many stochastic processes in practice having the sequences of random variables are generally skewed and dependent and to solve these problems, the application of first-order gamma autoregressive (GAR(1)) model[4] is very effective; especially in the study of streamflow simulation in Stochastic Hydrology. This paper mainly presents the study of Gar(1) model in the simulation of monthly streamflows. To reach this aim, we study Thomas-Fiering model and proposed the Gar(1)-Fragments model.
6p
vikoenigsegg
29-09-2022
11
2
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Lecture Power system stability - Lesson 2: Numeric Solution of Differential Equations provide students with knowledge about static versus dynamic analysis; slow versus fast dynamics; positive sequence versus full three-phase; power flow versus dynamics; interactive simulation: powerworld dynamics studio (DS);...
42p
hanthienngao
15-04-2022
13
1
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The phenotypes of cancer cells are driven in part by somatic structural variants. Structural variants can initiate tumors, enhance their aggressiveness, and provide unique therapeutic opportunities. Whole-genome sequencing of tumors can allow exhaustive identification of the specific structural variants present in an individual cancer, facilitating both clinical diagnostics and the discovery of novel mutagenic mechanisms.
15p
vigalileogalilei
27-02-2022
10
1
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Read alignment is the first step in most sequencing data analyses. Because a read’s point of origin can be ambiguous, aligners report a mapping quality, which is the probability that the reported alignment is incorrect. Despite its importance, there is no established and general method for calculating mapping quality.
12p
vialfrednobel
29-01-2022
11
0
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As single-cell RNA sequencing (scRNA-seq) technologies have rapidly developed, so have analysis methods. Many methods have been tested, developed, and validated using simulated datasets. Unfortunately, current simulations are often poorly documented, their similarity to real data is not demonstrated, or reproducible code is not available.
15p
vialfrednobel
29-01-2022
11
0
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The structure and mechanical properties of chromatin impact DNA functions and nuclear architecture but remain poorly understood. In budding yeast, a simple polymer model with minimal sequence-specific constraints and a small number of structural parameters can explain diverse experimental data on nuclear architecture.
15p
vialfrednobel
29-01-2022
12
0
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Accurate simulations of structural variation distributions and sequencing data are crucial for the development and benchmarking of new tools. We develop Sim-it, a straightforward tool for the simulation of both structural variation and long-read data.
16p
viarchimedes
26-01-2022
14
0
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In high-throughput sequencing data, performance comparisons between computational tools are essential for making informed decisions at each step of a project. Simulations are a critical part of method comparisons, but for standard Illumina sequencing of genomic DNA, they are often oversimplified, which leads to optimistic results for most tools.
37p
viarchimedes
26-01-2022
7
1
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Here, we develop k -mer substring space decomposition (Kssd), a sketching technique which is significantly faster and more accurate than current sketching methods. We show that it is the only method that can be used for large-scale dataset comparisons at population resolution on simulated and real data.
20p
viarchimedes
26-01-2022
11
0
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Aspiration is a main contributor to morbidity and mortality in anaesthesia. The ideal patient positioning for rapid sequence induction remains controversial. A head-down tilt and full cervical spine extension (Sellick) might prevent aspiration but at the same time compromise airway management.
9p
vampires36
30-12-2021
8
0
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During an emergency endotracheal intubation, rapid sequence induction intubation (RSII) with cricoid pressure (CP) is frequently implemented to prevent aspiration pneumonia. We evaluated the CVS in endotracheal intubation in RSII with CP, in comparison with a direct laryngoscope (DL).
7p
vampires36
30-12-2021
8
0
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