Unique gene clusters

Efficient regulation of bacterial genes in response to the environmental stimulus results in unique gene clusters known as operons. Lack of complete operonic reference and functional information makes the prediction of metagenomic operons a challenging task; thus, opening new perspectives on the interpretation of the host-microbe interactions.

14p vilichoo2711 25-06-2021 14 1   Download

The similarity or distance measure used for clustering can generate intuitive and interpretable clusters when it is tailored to the unique characteristics of the data. In time series datasets generated with high-throughput biological assays, measurements such as gene expression levels or protein phosphorylation intensities are collected sequentially over time, and the similarity score should capture this special temporal structure.

15p vicolorado2711 23-10-2020 14 1   Download

Horse gram leaf samples showing yellow mosaic symptoms gave positive results with HgYMV specific primer pairs (HgYMV-CP-F/HgYMV-CP-R) and yielded amplicons of ~1000 bp whereas no PCR product was obtained from DNA extracted from healthy samples in PCR. The 1000 bp PCR products were cloned, sequenced, assembled and its length was determined as 885 bp including 111 bp pre-coat protein at 5’ end and 774 core coat protein. The length of the predicted amino acid sequence was found to be 257.

11p nguaconbaynhay3 07-02-2020 15 0   Download

Despite the unique phenotypic properties and clinical importance ofPeni-cillium marneffei, the polyketide synthase genes in its genome have never been characterized. Twenty-three putative polyketide synthase genes and two putative polyketide synthase nonribosomal peptide-synthase hybrid genes were identified in theP.

9p viettel02 19-02-2013 36 3   Download