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Sequence database
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In this study, we propose the application of CycleGAN to generate T2 pulse sequence MRI images of the human brain from T2 Flair pulse sequence images of the same type and vice versa, thereby increasing the number of MRI images of various types.
8p
vithomson
02-07-2024
0
0
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The Insecta are the most diverse group of animals on the planet. The diversity of Plecoptera aquatic insect order is used as an environmental and ecological indicator. The study of endemic species is important for confirming the national biodiversity and contributing to the determination of national sovereignty. Despite Vietnam being a biodiversity hotspot, the number of known insect species remains limited.
11p
viambani
18-06-2024
3
1
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In this study, we conducted sequencing of the entire gene coding region (WES) in the patient and identified a compound heterozygote variants (c.289C>G, p.Arg97Gly and c.433C>T, p.Arg145Trp) in the TNNI3 gene. These variants were inherited from the patient's father and mother, who were heterozygous variant carriers. These variants were also identified as the pathogenic variants in the ClinVar database (accession number VCV001331910.2 and VCV000012426.28, respectively) and were the cause of the patient's disease.
12p
dianmotminh02
03-05-2024
1
1
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UML has become a standard modeling language because of its programming language independence. UML is used to design software and information systems in the form of common UML diagrams: use case diagrams, class diagrams, sequence diagrams, state diagrams, activity diagrams, component diagrams, and deployment diagrams. The research used case diagrams to design the land price information system functions and class diagrams to design the land price database. Therefore, we use UML language to create a land price information system and land price database for Dan Phuong district, Hanoi city.
12p
dianmotminh02
03-05-2024
3
2
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This study reported that the CHI4A gene was isolated from P. mirifica to validate the CHI4A unigenes obtained from the P. mirifica transcriptomic database (data not shown). This work provides more information about the variation and protein profile of the CHI4A gene for further experiments.
8p
dianmotminh02
03-05-2024
7
2
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Although large-scale, next-generation sequencing (NGS) studies of cancers hold promise for enabling precision oncology, challenges remain in integrating NGS with clinically validated biomarkers. To overcome such challenges, we utilized the Database of Evidence for Precision Oncology (DEPO) to link druggability to genomic, transcriptomic, and proteomic biomarkers.
20p
vibransone
28-03-2024
3
2
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Here, we present the Northeast Asian Reference Database (NARD), including whole-genome sequencing data of 1779 individuals from Korea, Mongolia, Japan, China, and Hong Kong. NARD provides the genetic diversity of Korean (n = 850) and Mongolian (n = 384) ancestries that were not present in the 1000 Genomes Project Phase 3 (1KGP3).
10p
vibransone
28-03-2024
2
2
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Onco-proteogenomics aims to understand how changes in a cancer’s genome influences its proteome. One challenge in integrating these molecular data is the identification of aberrant protein products from massspectrometry (MS) datasets, as traditional proteomic analyses only identify proteins from a reference sequence database.
12p
vioraclene
31-03-2024
6
2
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Clinical genomic testing is dependent on the robust identification and reporting of variant-level information in relation to disease. With the shift to high-throughput sequencing, a major challenge for clinical diagnostics is the cross-identification of variants called on their genomic position to resources that rely on transcript- or protein-based descriptions.
14p
vioraclene
31-03-2024
5
2
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The frequency of a variant in the general population is a key criterion used in the clinical interpretation of sequence variants. With certain exceptions, such as founder mutations, the rarity of a variant is a prerequisite for pathogenicity.
14p
vioraclene
31-03-2024
7
2
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Ebook "High-performance in-memory genome data analysis: How in-memory database technology accelerates personalized medicine" provide details on innovative approaches to enabling the processing, combination, and analysis of relevant data in real-time. The book bridges the gap between medical experts, such as physicians, clinicians, and biological researchers, and technology experts, such as software developers, database specialists, and statisticians.
239p
manmanthanhla0201
26-02-2024
7
1
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Ebook "Pattern recognition in bioinformatics: 5th IAPR international conference, PRIB 2010 Nijmegen, The Netherlands, September 22-24, 2010 proceedings" has two main objectives: the creation and maintenance of biological databases and the analysis of life sciences data in order to unravel the mysteries of biological function. Computer science methods such as pattern recognition, machine learning, and data mining have a great deal to offer the field of bioinformatics.
458p
tachieuhoa
28-01-2024
4
2
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This paper produces an effective algorithm and experimental results for mining closed sequential patterns from the sequence database using the parent–child relationship on the prefix tree structure. Experimental results show that the performance runtime of the proposed algorithm is much faster than that of other algorithms by more than one order of magnitude and the number of sequential patterns is reduced significantly.
7p
vimarillynhewson
02-01-2024
5
3
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This study aimed to build a signature on the basis of NRGs to evaluate the prognosis of HCC patients. In this study, using bioinformatic analyses of transcriptome sequencing data of HCC (n=370) from The Cancer Genome Atlas (TCGA) database, 63 differentially expressed NRGs between HCC and adjacent normal tissues were determined. 24 differentially expressed NRGs were found to be related with overall survival (OS).
16p
vialfrednobel
23-12-2023
5
3
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Researches have manifested that the disorder of iron metabolism is participated in Gastric cancer (GC), but whether iron metabolism-relevant genes (IMRGs) is related to the survival outcome of GC remain unknown.
16p
vialfrednobel
23-12-2023
9
2
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A subset of meningiomas progress in histopathological grade but drivers of progression are poorly understood. We aimed to identify somatic mutations and copy number alterations (CNAs) associated with grade progression in a unique matched tumour dataset.
11p
vischultz
20-10-2023
4
1
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Ebook "Developing bioinformatics computer skills" includes content: Audience for this book, biology in the computer age, computational approaches to biological questions, setting up your workstation, files and directories in unix, working on a unix system, biological research on the web, sequence analysis, pairwise alignment, and database searching,...and other contents.
344p
haojiubujain07
20-09-2023
4
2
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Long non-coding RNAs play an important role in the development of colorectal cancer (CRC), while many CRC-related lncRNAs have not yet been identified. The relationship between the expression of LINC00955 (Long Intergenic Non-protein Coding RNA 955) and the prognosis of colorectal cancer patients was analyzed using the sequencing results of the TCGA database.
20p
vioracle
29-09-2023
3
2
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In this study, we sequenced the chloroplast gene region (matK) to identify the genetic characteristics of T. chantrieri and their phylogenetic inference in the genus Tacca in Ba Vi National Park (Ba Vi NP). This study contributes to developing a DNA barcode database as a foundation for conservation, evolution, and biological systems.
11p
viblackwidow
07-04-2023
11
3
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The tertiary gene pool of bread wheat, to which Leymus racemosus belongs, has remained underutilized due to the current limited genomic resources of the species that constitute it. Continuous enrichment of public databases with useful information regarding these species is, therefore, needed to provide insights on their genome structures and aid successful utilization of their genes to develop improved wheat cultivars for effective management of environmental stresses.
17p
vinarcissa
21-03-2023
5
1
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