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SNP array
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We evaluated the performance of single-nucleotide polymorphism (SNP) genotyping arrays OncoScan (Thermo Fisher Scientific, San Diego, CA) and Infinium CytoSNP-850K (CytoSNP; Illumina, Waltham, MA) for assessing homologous recombination deficiency (HRD) genomic instability.
9p
vileonardodavinci
23-12-2023
4
3
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Phân tích các bất thường di truyền của thai có siêu âm bất thường tim mạch bằng kỹ thuật SNP array. Với phương pháp nghiên cứu mô tả cắt ngang, 62 thai có siêu âm bất thường tim mạch trong thời gian từ 10/2022- 6/2023 được chẩn đoán trước sinh tại Trung tâm chẩn đoán trước sinh bệnh viện Phụ sản Trung ương.
6p
vimichaelfaraday
14-12-2023
7
5
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Part 1 book "Equine genomics" includes content: Defining the equine genome - The nuclear genome and the mitochondrial genome, genetic linkage maps, physical and comparative maps, the Y-chromosome, unexpected structural features of the equine major histocompatibility complex, assembly and analysis of the equine genome sequence, genomic tools and resources - Development and applications of an equine SNP genotyping array, functional genomics, coat color genomics.
167p
oursky04
14-09-2023
4
2
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Bài viết trình bày đánh giá bất thường di truyền ở thai nhi có tăng khoảng sáng sau gáy (KSSG) hoặc Cystic Hygroma (CH) vùng gáy. Đối tượng: 33 thai nhi có kết quả siêu âm tăng KSSG hoặc CH vùng gáy được tiến hành chọc hút lấy mẫu dịch ối để chẩn đoán di truyền trước sinh bằng kỹ thuật SNP array và lập công thức nhiễm sắc thể (karyotyping) tại bệnh viện phụ sản Trung Ương.
8p
viengels
25-08-2023
10
5
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Nghiên cứu mô tả cắt ngang trên 30 thai nhi có dị tật tim mạch trên siêu âm được tiến hành chọc hút dịch ối chẩn đoán trước sinh tại bệnh viện phụ sản Trung ương trong thời gian từ 07/2020 đến 8/2021. Bài viết phân tích SNP array của thai có bất thường tim mạch trên siêu âm.
8p
viengels
25-08-2023
7
4
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The soil borne, obligate biotrophic fungus Synchytrium endobioticum causes tumor-like tissue proliferation (wart) in potato tubers and thereby considerable crop damage. Chemical control is not effective and unfriendly to the environment. S. endobioticum is therefore a quarantined pathogen. The emergence of new pathotypes of the fungus aggravate this agricultural problem.
16p
vinarcissa
21-03-2023
5
1
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Pod constriction is an important descriptive and agronomic trait of peanut. For the in-shell Virginia marketing-type, this trait has commercial importance as well, since deeply constricted pods have a tendency to break, which makes them unmarketable.
9p
vihagrid
30-01-2023
5
3
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Population structure of five native sheep breeds of Sweden estimated with high density SNP genotypes
Native Swedish sheep breeds are part of the North European short-tailed sheep group; characterized in part by their genetic uniqueness. Our objective was to study the population structure of native Swedish sheep. Five breeds were genotyped using the 600 K SNP array.
9p
vihagrid
30-01-2023
10
3
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Mitochondrial haplogroup assignment is an important tool for forensics and evolutionary genetics. African populations are known to display a high diversity of mitochondrial haplogroups. In this research we explored mitochondrial haplogroup assignment in African populations using commonly used genome-wide SNP arrays.
8p
vihagrid
30-01-2023
10
4
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Two individuals with a first-degree relationship share about 50 percent of their alleles. Parent–offspring relationships cannot be homozygous for alternative alleles (genetic exclusion). Methods: Applying the concept of genetic exclusion to HD arrays typed in animals for experimental purposes or genomic selection allows estimation of the rate of rejection of first-degree relationships as the rate at which two individuals typed for a large number of Single Nucleotide Polymorphisms (SNPs) do not share at least one allele.
12p
vihagrid
30-01-2023
8
3
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Bài viết Chẩn đoán trước sinh thai có kết quả siêu âm bất thường bằng kỹ thuật SNP array bước đầu đánh giá giá trị của kỹ thuật SNP array trong chẩn đoán trước sinh thai có kết quả siêu âm bất thường.
10p
vihermione
23-12-2022
10
4
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SNP Array là thế hệ mới nhất trong các kĩ thuật microarray, khắc phục được những hạn chế và bổ sung những tính năng mới, tối ưu hơn các kĩ thuật trước đó, giúp phát hiện các mất cân bằng bộ gen với độ phân giải cao. Nghiên cứu này nhằm phát hiện bất thường di truyền bằng kĩ thuật SNP Array ở các thai nhi có chỉ định chẩn đoán trước sinh và so sánh kết quả của kĩ thuật này với nhiễm sắc thể đồ.
6p
vimarillynhewson
17-05-2022
40
2
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Improvement of wheat gercTriticum aestivum L.) yield could relieve global food shortages. Kernel size, as an important component of 1000-kernel weight (TKW), is always a significant consideration to improve yield for wheat breeders. Wheat related species possesses numerous elite genes that can be introduced into wheat breeding. It is thus vital to explore, identify, and introduce new genetic resources for kernel size from wheat wild relatives to increase wheat yield.
12p
vilarryellison
29-10-2021
7
0
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The detection of signatures of selection in genomic regions provides insights into the evolutionary process, enabling discoveries regarding complex phenotypic traits. In this research, we focused on identifying genomic regions affected by different selection pressures, mainly highlighting the recent positive selection, as well as understanding the candidate genes and functional pathways associated with the signatures of selection in the Mangalarga Marchador genome.
17p
vilarryellison
29-10-2021
16
0
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Beak deformity, typically expressed as the crossing of upper and lower mandibles, is found in several indigenous chicken breeds, including the Beijing-You chickens studied here. Beak deformity severely impairs the birds’ growth and welfare. Although previous studies shed some light on the genetic regulation of this complex trait, the genetic basis of this malformation remains incompletely understood.
10p
vibeauty
23-10-2021
16
1
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Single nucleotide polymorphism (SNP) panels have been widely used to study genomic variations within and between populations. Methods of SNP discovery have been a matter of debate for their potential of introducing ascertainment bias, and genetic diversity results obtained from the SNP genotype data can be misleading. We used a total of 42 chicken populations where both individual genotyped array data and pool whole genome resequencing (WGS) data were available.
16p
vibeauty
23-10-2021
9
1
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Runs of Homozygosity (ROH) are genomic regions where identical haplotypes are inherited from each parent. Since their first detection due to technological advances in the late 1990s, ROHs have been shedding light on human population history and deciphering the genetic basis of monogenic and complex traits and diseases. ROH studies have predominantly exploited SNP array data, but are gradually moving to whole genome sequence (WGS) data as it becomes available. WGS data, covering more genetic variability, can add value to ROH studies, but require additional considerations during analysis
12p
vibeauty
23-10-2021
9
0
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Genomic regions with a high frequency of runs of homozygosity (ROH) are related to important traits in farm animals. We carried out a comprehensive analysis of ROH and evaluated their association with production traits using the BovineHD (770 K) SNP array in Chinese Simmental beef cattle.
12p
vitzuyu2711
29-09-2021
5
1
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Norway spruce [Picea abies (L.) Karst.] is ecologically and economically one of the most important conifer worldwide. Our main goal was to develop a large catalog of annotated high confidence gene SNPs that should sustain the development of genomic tools for the conservation of natural and domesticated genetic diversity resources, and hasten tree breeding efforts in this species.
13p
viseulgi2711
31-08-2021
10
1
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Inter- and intra-breed genome-wide copy number diversity in a large cohort of European equine breeds
Copy Number Variation (CNV) is a common form of genetic variation underlying animal evolution and phenotypic diversity across a wide range of species. In the mammalian genome, high frequency of CNV differentiation between breeds may be candidates for population-specific selection.
12p
visilicon2711
20-08-2021
10
1
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